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On the calculation of diffusion coefficients in confined fluids and interfaces with an application to the liquid-vapor interface of water

机译:关于密闭流体中扩散系数的计算   与水的液 - 气界面的应用接口

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摘要

We propose a general methodology for calculating the self-diffusion tensorfrom molecular dynamics for a liquid with a liquid-gas or liquid-solidinterface. The standard method used in bulk fluids, based on computing the meansquare displacement as a function of time and extracting the asymptotic lineartime dependence from this, is not valid for systems with interfaces or forconfined fluids. The method proposed here is based on imposing virtual boundaryconditions on the molecular system and computing survival probabilities andspecified time correlation functions in different layers of the fluid up to andincluding the interfacial layer. By running dual simulations, one based on MDand the other based on Langevin dynamics, using the same boundary conditions,one can fit the Langevin survival probability at long times to the MD computedsurvival probability, thereby determining the diffusion coefficient as afunction of distance of the layers from the interface. We compute the elementsof the diffusion tensor of water as a function of distance from the liquidvapor interface of water. Far from the interface the diffusion tensor is foundto be isotropic, as expected, and the diffusion coefficient has the value$D\approx$ .22\AA$^2$/psec in agreement with what is found in the bulk liquid.In the interfacial region the diffusion tensor is axially anisotropic, withvalues of $D_{\parallel}\approx$. 8\AA$^2$/psec and $D_{\perp}\approx$.5\AA$^2$/psec for the components parallel and normal the interface surfacerespectively. We also show that diffusion in confined geometries can becalculated by imposing appropriate boundary conditions on the molecular systemand computing time correlation functions of the eigenfunctions of the diffusionoperator corresponding to the same boundary conditions.
机译:我们提出了一种通用的方法,用于从分子动力学计算具有液-气或液-固界面的液体的自扩散张量。在散装流体中使用的标准方法基于计算作为时间函数的均方位移并从中提取渐近线性时间依赖性,该方法不适用于具有界面或受限流体的系统。此处提出的方法是基于在分子系统上施加虚拟边界条件,并计算直至和包括界面层的流体不同层中的生存概率和指定的时间相关函数。通过运行双重仿真,一个基于MD,另一个基于Langevin动力学,使用相同的边界条件,一个可以使Langevin的生存概率长时间适合于MD计算的生存概率,从而确定扩散系数与层距离的函数关系从界面。我们计算了水扩散张量的元素,该元素是距水的液体蒸汽界面的距离的函数。正如预期的那样,在远离界面的地方发现了扩散张量是各向同性的,并且扩散系数的值$ D \ approx $ .22 \ AA $ ^ 2 $ / psec与散装液体中的值一致。在界面区域,扩散张量在轴向上是各向异性的,其值为$ D _ {\ parallel} \ approx $。平行和垂直于界面表面的分量分别为8 \ AA $ ^ 2 $ / psec和$ D _ {\ perp} \ approx $ .5 \ AA $ ^ 2 $ / psec。我们还表明,可以通过在分子系统上施加适当的边界条件并计算与相同边界条件相对应的扩散算子本征函数的时间相关函数,来计算受限几何形状中的扩散。

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